Insertion junction: CLIP2.073983_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073983
Chromosome:plastome
Location:96876
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802305 2716992,ChreCp041,rpoB2 (1 of 2) K03043 - DNA-directed RNA polymerase subunit beta (rpoB); RNA polymerase beta subunit II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATAATTCAGGAGAAAAAATAGGCAGTGGCGGTACCACTGCCACTGCCG
Internal bar code:CGGAGCCAGTATAGGAATCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:11.5385
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGTGACGCAGCCTTGAA
Suggested primer 2:TCAACAGCAGCTCCATCTGG