Insertion junction: CLIP2.073991_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073991
Chromosome:chromosome 12
Location:3230227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499700 MFT3,MAE3 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACTGTACGGCTATGTGGGTCGAGTGATGTGCTGAATGTGACCACGAG
Internal bar code:TACGGTCAAATCCCTATAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2666
LEAP-Seq percent confirming:85.4167
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCACCCAGGCTTCCATG
Suggested primer 2:CTAACACTGACGCGCATGTG