Insertion junction: CLIP2.073991_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073991
Chromosome:chromosome 12
Location:3230248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499700 MFT3,MAE3 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATTCCGTTTACACCCGCTCTAGGGATAAATCAGGTCCCCTCTCGTGA
Internal bar code:TCGGTACTATTGATGAAGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2667
LEAP-Seq percent confirming:87.6923
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACACTGACGCGCATGTG
Suggested primer 2:ATTCCACCCAGGCTTCCATG