Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | + |
Strain: | CLIP2.073992 |
Chromosome: | plastome |
Location: | 170390 |
Confidence (%): | 40 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
CreCp.g802326 | psaJ,2716958,ChreCp061 | photosystem I subunit IX; (1 of 1) K02697 - photosystem I subunit IX (psaJ) | CDS |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GTAAAAGTAAACCAAATAGTAGCAATTACAGGTGCTGTTGATAAATAAGT |
Internal bar code: | GGTTATTAATTTAAATTATGTC |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 221 |
LEAP-Seq percent confirming: | 52.1739 |
LEAP-Seq n confirming: | 12 |
LEAP-Seq n nonconfirming: | 11 |
LEAP-Seq n unique pos: | 23 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | TTTGCAACTTTAGCGGGTGC |
Suggested primer 2: | TTGCAGCTGTTTTTGACCCC |