Insertion junction: CLIP2.073992_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073992
Chromosome:plastome
Location:170390
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802326 psaJ,2716958,ChreCp061 photosystem I subunit IX; (1 of 1) K02697 - photosystem I subunit IX (psaJ) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAAAGTAAACCAAATAGTAGCAATTACAGGTGCTGTTGATAAATAAGT
Internal bar code:GGTTATTAATTTAAATTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:221
LEAP-Seq percent confirming:52.1739
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAACTTTAGCGGGTGC
Suggested primer 2:TTGCAGCTGTTTTTGACCCC