Insertion junction: CLIP2.073997_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073997
Chromosome:chromosome 10
Location:2578681
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g436650 HEL45 (1 of 1) PTHR24031//PTHR24031:SF181//PTHR24031:SF50 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 // DEAD/DEAH BOX RNA HELICASE FAMILY PROTEIN; DEAD/DEAH box helicase-related protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGGGAGGTGCAGCAGTTGAGGGGGGAGTTTTGGAATTGCGACGTGG
Internal bar code:TACTGAGTTGGTGCACGGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:334
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGCTGGAAAGCAGATCT
Suggested primer 2:CTGTCCACCTGTCCTCCAAC