Insertion junction: CLIP2.074007_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074007
Chromosome:chromosome 4
Location:105138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216600 RPT6 (1 of 1) K03066 - 26S proteasome regulatory subunit T6 (PSMC5, RPT6); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGTGTCCCCTCTTCAGCGCCTTGACCCAACACACACGTGCACGTGC
Internal bar code:CGTAAATGACACTCATGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGAACCCAATGCAGCAGA
Suggested primer 2:ATGTGTATGTGTCCAGCGCA