Insertion junction: CLIP2.074007_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074007
Chromosome:chromosome 4
Location:105138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216600 RPT6 (1 of 1) K03066 - 26S proteasome regulatory subunit T6 (PSMC5, RPT6); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCTTTCAAGTCGCGGGCCGTGGTCGGTGCCGTACATGTTGGCGTAC
Internal bar code:AGTGGGGGCGTTTCTGTATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:972
LEAP-Seq percent confirming:12.766
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTATGTGTCCAGCGCA
Suggested primer 2:ATCGAACCCAATGCAGCAGA