Insertion junction: CLIP2.074016_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074016
Chromosome:chromosome 3
Location:7406075
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g206201 (1 of 1) PTHR10799//PTHR10799:SF277 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGATCACAGTGCAGTAGGCTGCCGCAGCCGCTCACCATCACTGGAGG
Internal bar code:ATGATTACGCTGAGTGATGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGTACAGCCTTGCTTGT
Suggested primer 2:GGCGAACAACTCAGGCTACT