Insertion junction: CLIP2.074025_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074025
Chromosome:chromosome 13
Location:1901918
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g575800 IGS1 Indole-3-glycerol-phosphate synthase; (1 of 2) 4.1.1.48 - Indole-3-glycerol-phosphate synthase / Indoleglycerol phosphate synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACCCCGCCCCTTACCCCCTGGTTTGGTTTGATTTGGGCTGGTATCT
Internal bar code:TGTAACTATGTTCGATTTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACACATACACTCACCC
Suggested primer 2:ATGGGGATGAGTGGGGATGA