Insertion junction: CLIP2.074038_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074038
Chromosome:chromosome 10
Location:2815584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438850 ROC76 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCTGGTGCTGCGTCGGGGCTCATGTCAGCACGCCGACGTGGCAAACT
Internal bar code:CTTGAGCACCCCGGGCAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGAGCCCTGTCAGGAAC
Suggested primer 2:GCAAGCCCTTGTGCTGTTAC