Insertion junction: CLIP2.074039_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074039
Chromosome:chromosome 9
Location:6645461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416450 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGACATTAGAATGGACACAGTGTTAACGAGTGCGAGGGACTGGGCCTT
Internal bar code:TCTCGGATACAGACCCCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1815
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGAGCGCAGGTTAATTG
Suggested primer 2:GGAAACGGTACATGCGCATC