Insertion junction: CLIP2.074041_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074041
Chromosome:chromosome 13
Location:4134757
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g591200 HTB38,HTB22 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCATGGTTGCGATAAGGAATGTGTTGGAGTAGGGTTGTGGGGGGCC
Internal bar code:GGGCATGTGCGTTAGGGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCTTGCCAGAGGTCTT
Suggested primer 2:GCTTTAGCCCGAGGTGAACT