Insertion junction: CLIP2.074043_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074043
Chromosome:chromosome 6
Location:8703964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCGGAAACGCTTCTAACTTCTTTCCTTTGCCATACCGGCGTGGCAT
Internal bar code:TTCATAGACTATTAGACAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1664
LEAP-Seq percent confirming:55.9322
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATGCCAAGCAGGTCCAA
Suggested primer 2:TGTCCTTGCGCATCTCCTTT