Insertion junction: CLIP2.074054_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074054
Chromosome:chromosome 16
Location:7329388
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g678997 (1 of 2) 2.4.2.38 - Glycoprotein 2-beta-D-xylosyltransferase / Beta-1,2-xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGCACGGCGCCCGGCCCCCACCTGCAGGCCCTGGTCCACCAGTCGC
Internal bar code:CCTGGCTCGGGGCGGATTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTACCGTAGCTGCGCAG
Suggested primer 2:CAGGAGCAAGAGGAGCACAA