Insertion junction: CLIP2.074055_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074055
Chromosome:chromosome 6
Location:3321857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277550 (1 of 3) 3.5.5.1 - Nitrilase 3'UTR
Cre06.g277600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGATGTCTGCACAATGACCCTCCAATTATGGCGGCTGCGTTGCCCCTG
Internal bar code:CTGTAACACGACAGGTGTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TAACGCGGGACCAATTCTCC
Suggested primer 2:TGGTTGTGAGCAGCTAAGCA