Insertion junction: CLIP2.074060_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074060
Chromosome:chromosome 6
Location:7343689
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g299800 LCL1 Long-chain-fatty-acid-CoA ligase; (1 of 1) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTATGAAGTGTGGGCGTGGGCGTGGCGAGTGGCATTGTTAGGAAGTG
Internal bar code:GATGACGTTAATGGATTGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCCCCCAAGGTGTACAC
Suggested primer 2:GTGGGAAGGAGGTGGAGTTG