Insertion junction: CLIP2.074069_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074069
Chromosome:chromosome 12
Location:8802295
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g546900 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGCCTCATGACACTTCAGCCGCCGCTACGCGCATCGCGCACACTTTT
Internal bar code:GTAATGTGGTGTGAGTTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:102
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCCCAAACTGAACCAA
Suggested primer 2:ACACCTCCTGCACCTCCTAT