Insertion junction: CLIP2.074071_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074071
Chromosome:chromosome 4
Location:2411285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221450 PHC54 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGACGTCGTCTTATCTTGCTGTGCTCATCAAGCTTGCTCATTGAAGC
Internal bar code:GACACGTACGTGACGGAATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGTCAAGTACAACCAGA
Suggested primer 2:CAACCAAGGAAGTGCTGTGC