Insertion junction: CLIP2.074072_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074072
Chromosome:chromosome 7
Location:542637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR
Cre07.g800770 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGAAATGCATCAGCGATGAAAGGCAATACCCTTTTACGTACATAATA
Internal bar code:GGAGGCAAATAGCCAGACGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCACAGGAACACGGGTG
Suggested primer 2:GAGCATATCCCTGGGCCATC