Insertion junction: CLIP2.074079_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074079
Chromosome:chromosome 17
Location:3706778
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g725950 CSR13 (1 of 3) K08106 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase (CHST15); Carbohydrate sulfotransferase-related 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGTATGGGAGTGGCCTAATGCCGCGCAGCACGTGCAAGCTGCAATG
Internal bar code:TTGTCAGGACTACGTTGCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCATCTCTGCCTCTCCGA
Suggested primer 2:CCCAGCAGCCTCAAACAAAC