Insertion junction: CLIP2.074081_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074081
Chromosome:chromosome 5
Location:3167584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232000 (1 of 1) IPR001623//IPR011989 - DnaJ domain // Armadillo-like helical 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACAAGGCGTGAATGCACGACTAATGTGTTTGTGTGTTTTATAAACAG
Internal bar code:GGGTGGATGGTTCCTGTAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATAATGCGCTGGCTTC
Suggested primer 2:GCATTTATTCGCAGCTGCCA