Insertion junction: CLIP2.074087_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074087
Chromosome:chromosome 8
Location:1666138
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g366050 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCATCGTCACCCCCTCCTTCCTCGCGCACCCTCCACACGCACGCGTC
Internal bar code:GGCAGGGTCTTCGCGTCGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:251
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAGGGAGCTGGCTGAGGA
Suggested primer 2:GACCGCGACATACACAATGC