Insertion junction: CLIP2.074095_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074095
Chromosome:plastome
Location:60816
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802288 rps7,2716973,ChreCp024 30S ribosomal protein S7; (1 of 2) K02992 - small subunit ribosomal protein S7 (RP-S7, MRPS7, rpsG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGCATGCGATAAGCGCTCAGGTCAACCAATGGTTACAAAATTAAAA
Internal bar code:TGTGCACGCCCGTCACTAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:34.6939
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACCGCGCTTAAAGGCT
Suggested primer 2:ATTAGTGGCAGTGGTACCGC