Insertion junction: CLIP2.074101_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074101
Chromosome:chromosome 3
Location:5799999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTGCCTGCAGCCCATACTACCACTTGGAATGATTGTGCTTACCCTTC
Internal bar code:GCGGTGGATTTATGCGCACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:82.7957
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGAGCTGCAAAATCGAG
Suggested primer 2:TTAGGGGGTGGCGAGGATTA