Insertion junction: CLIP2.074104_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074104
Chromosome:chromosome 8
Location:1115622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362682 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCGCGACCTCGCAAGCGCCGGGAATGGCACGCGGCGCTCGGCGAGA
Internal bar code:GGCCGGAGCGGGTTAGTGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3816
LEAP-Seq percent confirming:51.087
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGTTGAGCTGAAGCAG
Suggested primer 2:AAGCTCGCAACCCAAGCTAT