Insertion junction: CLIP2.074105_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074105
Chromosome:chromosome 16
Location:3607209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672041 (1 of 1) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase outside_mRNA
Cre16.g672397 DIV174 (1 of 3) K17499 - protein phosphatase 1G [EC:3.1.3.16] (PPM1G, PP2CG) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTAAGCGTAATTGTTGGCTTCCAACTGTTTGTTGCTATTGTCGCAG
Internal bar code:CGGGAAGGGGTTCGTGCACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATACCAACAGCGCCATT
Suggested primer 2:TCCATCGAACACGCCAAAGA