Insertion junction: CLIP2.074111_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074111
Chromosome:chromosome 6
Location:5995604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAGCATGGCTTGGCCCCAGGTCCAAGAAGGCTGTTTCCCCGCCATGC
Internal bar code:TTAAGGGCGACAAACACGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1243
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGAAGAATATCTGCGGGA
Suggested primer 2:TTGTGAGCTACCAGCACCTG