Insertion junction: CLIP2.074123_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074123
Chromosome:chromosome 17
Location:2139645
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g712000 SRS16,SCL26,SRS11 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) 3'UTR
Cre17.g712050 (1 of 8) PF01697 - Glycosyltransferase family 92 (Glyco_transf_92) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCAATGCCTGCTGTGCGCGCAGGGGTCTGGCCGTCTGGGCGTGGGGT
Internal bar code:GACTAAGGTCCGATATGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:47.3684
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAAGGGATAGGATGGCG
Suggested primer 2:TACTTCCTCACCGTCAACGC