Insertion junction: CLIP2.074129_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074129
Chromosome:chromosome 13
Location:4246445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591951 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCATTAAACTTTTCGACACAAGCCATGCCAATATGCTATCCACCAACA
Internal bar code:CGATATTGTGGGGTCGTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAACTGGATGCTCAGCT
Suggested primer 2:GTGGAACTCTCATGCCGTGA