Insertion junction: CLIP2.074143_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074143
Chromosome:plastome
Location:132260
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802319 2717001,ChreCp055,rps11 30S ribosomal protein S11; (1 of 1) IPR019981 - Ribosomal protein S11, bacterial-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGTGGCCTGCTTGAATATGAACTACACCTCTAAAAATTTTCTTTTTT
Internal bar code:TGGCGAGACACTCGAAGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGCCTTTAAGGTCTGC
Suggested primer 2:ATGGGTTACCTGGGACTCGA