Insertion junction: CLIP2.074147_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074147
Chromosome:chromosome 9
Location:951572
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g402750 COG2 Component of oligomeric golgi complex; (1 of 1) PTHR12961//PTHR12961:SF0 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 // CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGACTACATAGTGCAACATGTCACGACTTTTGTCTGTCGCTGCTGCTG
Internal bar code:ACCTGTTTATGGGTTTACCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGAACTGGTGCATATGC
Suggested primer 2:AATAGCTCGTCCGGCTTAGC