Insertion junction: CLIP2.074156_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074156
Chromosome:chromosome 15
Location:863384
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g640250 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCGTACACACCCCGCCCCCTCCACACCCAACCCGCACCCCACCTGGG
Internal bar code:GGTACCCGTCAGGTGCAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCTGTCTACCTCGCTA
Suggested primer 2:ACACGACCCTACTACGACGA