Insertion junction: CLIP2.074160_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074160
Chromosome:chromosome 1
Location:4176946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027950 IFT74,CMG1,IFT71,IFT72 (1 of 1) PTHR31432:SF0 - INTRAFLAGELLAR TRANSPORT PROTEIN 74 HOMOLOG; Intraflagellar transport protein 74/72 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGTACGGACATGCGCTCTTGTGCATCTCTTACAGCGTCATCCATACA
Internal bar code:GTCAATCGAGCGGGGTAGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAGAAGGCCGTGGTGTA
Suggested primer 2:GTGGTTGTGTCAGTGGTTGC