Insertion junction: CLIP2.074163_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074163
Chromosome:chromosome 11
Location:4298698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482450 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGGGTTTGGGTGCCGCGCATCTACGCAGGTGTAGACGTTTTTGGCCG
Internal bar code:AGTGCCTGGTTGGTGAAGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGTATTTACGGCGGAG
Suggested primer 2:AGCAAGTGGAGAGATGGTGC