Insertion junction: CLIP2.074200_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074200
Chromosome:chromosome 2
Location:4662041
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g107650 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCGGCGCAACTGCAGCAGAAGCCCAGCGCCCTTGTGTGTATATCATA
Internal bar code:GTGAGATAGGCAGGAGACGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAAACGTTCGCAGTTT
Suggested primer 2:CCGTCTGCCCACATTTCTCT