Insertion junction: CLIP2.074206_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074206
Chromosome:plastome
Location:5894
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGTTTGAGCTTGACTTCAAGCTTTAACCTCCGTCAGCGATAAAACCT
Internal bar code:GGCATAAAATTGCCCTTTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGCCAAATGCCTAGGT
Suggested primer 2:TGCAGGCCTTATCACGGTAC