Insertion junction: CLIP2.074214_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074214
Chromosome:chromosome 3
Location:9028399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202897 UBC34 E2 ubiquitin conjugating enzyme; (1 of 1) K10578 - ubiquitin-conjugating enzyme E2 J1 (UBE2J1, NCUBE1, UBC6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACACCTCGGACATTGCGGCGGCGCTGTAACGGCGCTGACTGCGAAA
Internal bar code:GTGACCTCGCTCTCTGTCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1746
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGGTGTGTGTGCAAAG
Suggested primer 2:CCAATCTCGGCCCTCATCTC