Insertion junction: CLIP2.074217_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074217
Chromosome:chromosome 3
Location:8280401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199500 FAP129 Flagellar Associated Protein 129 5'UTR
Cre03.g199550 (1 of 1) IPR000504//IPR012677//IPR014720 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain // Double-stranded RNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGATTGTTAGCACTTCAGCGAAGTTACTTTGGGAAAGGAGGCTTAAT
Internal bar code:TGTCCCTCTAAACTTCCAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCTTCGGAGTGGATGAT
Suggested primer 2:GTCCACGCTCTTGACTGTCA