Insertion junction: CLIP2.074232_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074232
Chromosome:chromosome 17
Location:2648058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716800 XUV7 Xanthine/uracil/vitamin C permease-like, sodium-dependent 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCACTGCCGAAGGTTTACACTTTCTCGATCGGTTCGTGTATTCGTTG
Internal bar code:CAAGGGTTAGGTATTTAACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:497
LEAP-Seq percent confirming:40.8451
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGGTTGTGCCTTTGTGG
Suggested primer 2:CTCGGACCTCGACGTCAATG