Insertion junction: CLIP2.074235_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.074235
Chromosome:chromosome 1
Location:2888316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017951 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCGCAAAAACACGTGTTGTTTCAGTATCCGGGACCTACGGGCGGCG
Internal bar code:AAGATTGCGCCCGCGCCGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3574
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTACTACCGCAGAGCTGA
Suggested primer 2:GTCATAGAGCTTGCGTCCGA