Insertion junction: CLIP2.074254_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.074254
Chromosome:chromosome 6
Location:37715
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g248850 (1 of 1) K08827 - serine/threonine-protein kinase PRP4 [EC:2.7.11.1] (PRPF4B) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAACGGGCTGCAGCTGCTGCTCCCGCTGTGGATCTACATGGCCTGGA
Internal bar code:GTTCTTTTTTCTTGGTTTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:66
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCATTGGCGCGAATGAC
Suggested primer 2:CGTCAGCACTGAACCGTAGT