Insertion junction: CLIP2.074267_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074267
Chromosome:chromosome 13
Location:4290642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592300 (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGTTGTCAGAGTGAAAGCGCCCGAGTTAGGGAATGTCGCAGTGTG
Internal bar code:CTCGGTGCTGGAGTTCATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGCACAAAAGCACACGCC
Suggested primer 2:CGTACGCACATTTGTAGCCG