Insertion junction: CLIP2.074268_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074268
Chromosome:chromosome 2
Location:6642901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389900 HRP4 Hydroxyproline-rich glycoprotein; (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGACTCCCGGCCACCCATTGCTCCTGACTAACACCGTTTACTCACT
Internal bar code:TCGGCCGCGCGGAGTGAACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1634
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCCTACACTTGGTGCG
Suggested primer 2:TGTCACATTGTGTCCGCGTA