Insertion junction: CLIP2.074273_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.074273
Chromosome:chromosome 14
Location:1752769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619166 CSK6 Casein kinase II-related Ser/Thr kinase, alpha chain; (1 of 3) K03097 - casein kinase II subunit alpha (CSNK2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGACCCCCTGCTGAGCTGTGTACGAGTGCTTGCTTTGTGTGGAGCA
Internal bar code:GACCGGGTGTGAATATGTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:502
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTGTTCTTTGAAGGCGC
Suggested primer 2:TTCATTCCCCTCGTGTGCTC