Insertion junction: CLIP2.074281_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.074281
Chromosome:chromosome 2
Location:3947252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102250 RPS3 Cytosolic 80S ribosomal protein S3; (1 of 1) K02985 - small subunit ribosomal protein S3e (RP-S3e, RPS3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGAGAGAAAGAGCGCGGTGGGGCCCAGTTGCTAAATACTCTGCATGG
Internal bar code:GGCCACCGGTCTTTTTCGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3461
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCATCGGACTAGCACG
Suggested primer 2:TTGAAGCGCTTCTGCACAAC