Insertion junction: CLIP2.074284_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.074284
Chromosome:chromosome 7
Location:3598451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336850 (1 of 3) PF01661 - Macro domain (Macro) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAGCCCATCATGGGACCAGTGTGCAGGGAAGGATCTTGGGCGTGGGG
Internal bar code:GCGGATACCGTTGGTGCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGCAATACGTGGGGTT
Suggested primer 2:TTTACGGGTTCCAGTGGCTC