Insertion junction: CLIP2.074284_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074284
Chromosome:chromosome 7
Location:3598453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336850 (1 of 3) PF01661 - Macro domain (Macro) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCCTCGGCGCCTCGGCCTCGGCGCCTCGGTTACCAAGTGCCAACTA
Internal bar code:GCGGATACCGTTGGTGCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4160
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACGGGTTCCAGTGGCTC
Suggested primer 2:CCTCTGCAATACGTGGGGTT