Insertion junction: CLIP2.074292_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074292
Chromosome:chromosome 3
Location:6707401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800369 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTGCCACAGCGTCACAGCCTCATAGGCCAGTCCGCAAGTCTCTAGAG
Internal bar code:CTGTGCTGCTTCTGGAGTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGGGGGAAGGGGAAAGG
Suggested primer 2:ATGTGAGTCCTCCTCCTCCC