Insertion junction: CLIP2.074296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.074296
Chromosome:chromosome 17
Location:6622452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745547 (1 of 1) PF05182 - Fip1 motif (Fip1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGTTTTGAGCGCCCCGCTCCCTGGACGGCACAGTGGGCGGCTGTAGC
Internal bar code:AAATGTGCCTCCTATGGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1854
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGCCCCATCCCATTCAT
Suggested primer 2:CTATTTTGCGTCCGCTTCCG