Insertion junction: CLIP2.074297_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.074297
Chromosome:chromosome 2
Location:1999692
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088300 CPK6 (1 of 1) PTHR10584:SF179 - PROTEIN MAK32; putative carbohydrate kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGATACCGACAGAACAGTCTGCAAACAGTAACATCACGTCGACATAG
Internal bar code:GTAAGCTACACTGTGAGTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1067
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCTGTCCTTCCATGTCC
Suggested primer 2:TCCTTGAACACCGAGAGCAC